Published Articles

Peer-reviewed

Frémont, P., et al. 2026. Coexistence of Photosynthetic Marine Microorganisms, Viruses and Grazers: Towards Integration in Ocean Ecosystem Models. Environmental Microbiology. 28, no. 4: e70295. doi:10.1111/1462-2920.70295. 

Rigonato, J. et al. Ocean-wide comparisons of mesopelagic planktonic community structures. ISME Communications. 3, 83 (2023).

Frémont, P. et al. Restructuring of plankton genomic biogeography in the surface ocean under climate change. Nature Climate Change. (2022). doi: 10.1038/s41558-022-01314-8

Richter, D. J. et al. Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems. eLife 11:e78129 (2022). doi:10.1101/867739

Delmont, T. O. et al. Functional repertoire convergence of distantly related eukaryotic plankton lineages revealed by genome-resolved metagenomics. Cell Genomics (2022). doi: 10.1016/j.xgen.2022.100123 (see associated website: Plankton website)

Guérin, N. et al. Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence. Communications Biology 5, 983 (2022). doi: 10.1038/s42003-022-03939-z

Busseni, G. et al. Large scale patterns of marine diatom richness: Drivers and trends in a changing ocean. Global Ecology and Biogeography (2020). doi:10.1111/geb.13161

Junier I., Frémont P., Rivoire O.. Universal and idiosyncratic characteristic lengths in bacterial genomes. Physical Biology, 15 (2018), 15(3):035001. doi:10.1088/1478-3975/aab4ac.

Preprints

Frémont, P. et al. Changes in gene expression in eukaryotic phytoplankton at the Atlantic-Arctic polar front. bioRxiv (2025). doi: 10.1101/2022.11.01.514737

Mestrallet G., Pierga A., Frémont P, Epigenetic profile drives accurate survival prediction in breast cancer via a multi-omics machine learning model. bioRxiv 2025.07.31.667894; doi: 10.1101/2025.07.31.667894